#Synteny
#Annotations
#Breakpoints
#Visualization
#Chromosomes
CHROMOSOME INTERACTIVE TOOL FOR REARRANGEMENT ANALYSIS

An advanced visualization tool for studying chromosomal rearrangements through interactive synteny block analysis and chromosome breakpoint mapping.

Workflow & Features

Open Flowchart in New Window

Required Files

Synteny data (CSV)
Species data (CSV)
Reference chromosome sizes (CSV)

Optional Files

Gene annotations (CSV)
Breakpoint data (CSV)

Visualization Options

  • Linear synteny view
  • Chord/circular map
  • Interactive filtering
DocumentationSource Code
FAQ
Common Questions about CHITRA

CHITRA (Chromosome Interactive Tool for Rearrangement Analysis) is an advanced bioinformatics tool for studying chromosomal rearrangements through interactive visualizations of synteny blocks and chromosome breakpoints.